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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822287.1_cds_XP_016501050.1_14823
CDS Infomation

[gene=LOC107819461] [db_xref=GeneID:107819461] [protein=putative UDP-rhamnose:rhamnosyltransferase 1] [protein_id=XP_016501050.1] [location=complement(join(1091..1916,2404..2969))] [gbkey=CDS]
Sequence

ATGGCTGAAACAAAGAAGCTTCATGTTGTGTTATTTCCATGGTTAGCTTTTGGCCACTTA
ATTCCATTTTTCGAACTTGCTAAACAAATTGCACGTAAGGGTCACAAAGTTTCCTATATT
TCAACTTCTAGAAACATCGATCGACTCCCAAAATTTTCTCAAAAGTTAAATTACTCCATA
CATTTTGTTAATCTTTCTCTACCTTTAACCAAAGGTCTACCAGAAAACGCGGAGGCCACA
AAGGATGTACCACTTGACAAGGTTCAATACCTCAAGAAGGCTTTTGATGGACTCGAATCC
GAGTTGACTCAGTTCCTCGAGGACTCAGTCCCCGATTGGATCATTTACGATTTTACCCCT
TATTGGTTGCCCCCGATCGCGGGTAGACTTGGAATTTCACGTGCCTTCTTTAGCACGTTT
AATGCATGGTCTAGTGTATTTTTTGGTCCGGCAAAAGACGTAATTGACGGTAATATTCAA
CGGACCAAGCCTGAGGATTTCACTGTTCCACCAAAATGGATCCCTTTTCCGTCCAATATA
GCATTCCGTCTCTATGAAATAAACAGGTATTTTGGCCATGGGCAAGAGAACGTCTCAGGC
GTCTCCGATTGGCATCGGTTTGGAGAATCAGTGTCCGGTTGTGATGTGTTTCTTGTACGT
AGTTGTAACGAGTTAGAGAGAGAATGGTTAGATCTTCTTCCAGAGCTTCATCAGAAACCT
ATCGTGCCAGTCGGCCTGTTGCCACCTTCCGTACAAGATACGGAAGGTGACAAAAGCTAT
GCATGGGGTTTTATTAATAATTGGTTAGCCATGCAACGTAAAAAATCAGTTGTTTACGTA
GCCCTAGGAACCGAGGCAACTCCGAGTCAAGAGGAACTCACTGAGTTGGCTCATGGGTTG
GAGTTATCCGGGTTGCCATTTTTCTGGGCTCTAAGGAAACAACATGATTTTTTATTGTTA
AAATTACCCGAAGGTTTCGAGGAACGTACCAAAACTCGAGGTATAGTTTGGATGAGTTGG
GCTCCACAACTCAGGATATTGGAACATGACTCAGTGGGTTGTTTTTTGACTCATTGTGGC
TGGGGTTCTATTATAGAAGGACTTCAATTTGGAAAACCCCTTGTTATGTTGCCTTTTTTG
GGAGATCAAGCACTAAATGCTCGATGTTTGGAAGAAAAAATGGTGGGATTAGAAATTCCA
AGAAATGAAAGGGATGGGTCTTTGACTCGGAACTCAGTGGCTGAGTCACTCAAATTAGTG
ATGAATGATGAGAAGGGAAAGATTTATTGGGAGAAAGCAAATGAAATGAGAAAAATATTT
GGAAACAGAGATTTATGTGATAACTACATAGATGACTTCATTGAATTCGTAAGAACAGAA
GTAATTGTATAG

Peptide Sequence

PEP ID

XP_016501050.1
PEP Infomation

PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Nicotiana tabacum]
Sequence

MAETKKLHVVLFPWLAFGHLIPFFELAKQIARKGHKVSYISTSRNIDRLPKFSQKLNYSI
HFVNLSLPLTKGLPENAEATKDVPLDKVQYLKKAFDGLESELTQFLEDSVPDWIIYDFTP
YWLPPIAGRLGISRAFFSTFNAWSSVFFGPAKDVIDGNIQRTKPEDFTVPPKWIPFPSNI
AFRLYEINRYFGHGQENVSGVSDWHRFGESVSGCDVFLVRSCNELEREWLDLLPELHQKP
IVPVGLLPPSVQDTEGDKSYAWGFINNWLAMQRKKSVVYVALGTEATPSQEELTELAHGL
ELSGLPFFWALRKQHDFLLLKLPEGFEERTKTRGIVWMSWAPQLRILEHDSVGCFLTHCG
WGSIIEGLQFGKPLVMLPFLGDQALNARCLEEKMVGLEIPRNERDGSLTRNSVAESLKLV
MNDEKGKIYWEKANEMRKIFGNRDLCDNYIDDFIEFVRTEVIV

Transcript Sequence

Gene sequence data has not been registered.